Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs13082158 chr3:48372470 T/C 4.4E-5 509 38.98 42.88 23.1 KM Plot
KIRC rs13082859 chr3:48344675 C/T 3.23E-5 522 39.62 41.27 19.13 KM Plot
KIRC rs13087929 chr3:48240289 G/A 5.54E-5 516 39.7 40.6 21.12 KM Plot
KIRC rs13095983 chr3:48354211 G/A 3.27E-5 523 39.62 41.27 19.13 KM Plot
KIRC rs13126680 chr4:186324841 T/A 9.02E-7 527 3.53 39.5 39.38 KM Plot
KIRC rs13191094 chr6:2395245 C/T 1.05E-6 514 42.27 36.38 11.25 KM Plot
KIRC rs13192365 chr6:25993968 T/C 7.66E-9 518 41.13 37.03 3.37 KM Plot
KIRC rs13192713 chr6:25943234 C/A 4.89E-5 523 42.27 30.52 6.8 KM Plot
KIRC rs13193424 chr6:25943646 G/C 5.07E-5 524 42.33 30.52 6.8 KM Plot
KIRC rs13194198 chr6:2431429 C/T 1.15E-7 525 40 39.87 5.47 KM Plot
KIRC rs13195279 chr6:25919431 T/A 2.0E-5 524 42.2 33.82 1.4 KM Plot
KIRC rs13195692 chr6:26044373 C/T 6.36E-9 522 41 36.95 3.37 KM Plot
KIRC rs13195969 chr6:50814627 C/A 4.92E-6 520 40.5 40.6 15.3 KM Plot
KIRC rs13196552 chr6:25974204 A/G 1.52E-8 511 41.27 36.95 2.38 KM Plot
KIRC rs13196801 chr6:165344350 C/T 4.02E-5 524 15.83 39.17 39.62 KM Plot